sigQC: Quality Control Metrics for Gene Signatures

Provides gene signature quality control metrics in publication ready plots. Namely, enables the visualization of properties such as expression, variability, correlation, and comparison of methods of standardisation and scoring metrics.

Version: 0.1.14
Depends: R (≥ 3.3.0)
Imports: MASS, lattice, KernSmooth, cluster, nnet, class, gridGraphics, biclust, gplots, ComplexHeatmap, RankProd, fmsb, moments, grDevices, graphics, stats, utils, mclust
Suggests: knitr, rmarkdown
Published: 2018-04-11
Author: Andrew Dhawan [aut], Alessandro Barberis [aut], Wei-Chen Cheng [aut], Francesca Buffa [aut, cre]
Maintainer: Francesca Buffa <francesca.buffa at oncology.ox.ac.uk>
License: file LICENSE
NeedsCompilation: no
Materials: README
CRAN checks: sigQC results

Downloads:

Reference manual: sigQC.pdf
Vignettes: "sigQC: Gene Signature Quality Control"
Package source: sigQC_0.1.14.tar.gz
Windows binaries: r-prerel: sigQC_0.1.14.zip, r-release: sigQC_0.1.14.zip, r-oldrel: sigQC_0.1.14.zip
OS X binaries: r-prerel: sigQC_0.1.14.tgz, r-release: sigQC_0.1.14.tgz
Old sources: sigQC archive

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