rnaCrosslinkOO: Analysis of RNA Crosslinking Data

Analysis of RNA crosslinking data for RNA structure prediction. The package is suitable for the analysis of RNA structure cross-linking data and chemical probing data.

Version: 0.1.2
Depends: seqinr, GenomicRanges, stats
Imports: ggplot2, reshape2, MASS, mixtools, utils, S4Vectors, patchwork, doParallel, igraph, R4RNA, RColorBrewer, IRanges, foreach, grDevices, heatmap3, TopDom, tidyverse, RRNA, ggrepel, methods, parallel, ClassDiscovery
Suggests: knitr, rmarkdown, testthat (≥ 3.0.0)
Published: 2024-02-29
Author: Jonathan Price ORCID iD [aut, cre], Andrew Lim [ctb]
Maintainer: Jonathan Price <jlp76 at cam.ac.uk>
BugReports: https://github.com/JLP-BioInf/rnaCrosslinkOO/issues
License: GPL-3
NeedsCompilation: no
Citation: rnaCrosslinkOO citation info
Materials: README
CRAN checks: rnaCrosslinkOO results

Documentation:

Reference manual: rnaCrosslinkOO.pdf
Vignettes: rnaCrosslinksOO

Downloads:

Package source: rnaCrosslinkOO_0.1.2.tar.gz
Windows binaries: r-prerel: rnaCrosslinkOO_0.1.2.zip, r-release: not available, r-oldrel: not available
macOS binaries: r-prerel (arm64): rnaCrosslinkOO_0.1.2.tgz, r-release (arm64): not available, r-oldrel (arm64): not available, r-prerel (x86_64): rnaCrosslinkOO_0.1.2.tgz, r-release (x86_64): not available

Linking:

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