# pedprobr 0.3

## New features

- The
`likelihood()`

function now handles multiple marker inputs. For example, the call `likelihood(x, 1:nMarkers(x))`

results in a vector with the likelihood of each marker attached to `x`

.

For likelihoods involving linked markers, e.g., likelihood(x, marker1, marker2, rho)`,`

marker1`may be a vector of marker indices, while`

marker2` must still refer to a single marker.

- Recombination parameter
`theta`

is renamed to `rho`

everywhere, to align with other ped suite packages. `theta`

still works, though.

## Other changes

Many input checks have been added, giving more useful error messages

The data structure used in likelihood calculations is simplified and more efficient.

Likelihood computation of two linked markers (and therefore also `twoMarkerDistribution()`

) is much faster now.

# pedprobr 0.2.0

## New features

New general MERLIN wrapper, `merlin()`

.

Both `likelihoodMerlin()`

and the new `merlin()`

now accepts ped lists.

## Bug fixes

- Fixed a bug affecting lumped mutation models.

# pedprobr 0.1.0