Various speedups, mainly concerning lumped models. These
improvements should give better performance in other parts of the
ped suite, especially in likelihood calculations with many
markers.
New function lumpedModel() which is a convenient
wrapper of lumpedMatrix().
New function sexEqual() for reading the
sexEqual attribute of a mutation model.
mutationModel() gains a new parameter
validate.validateMutationModel()
and validateMutationMatrix(), making them significantly
faster.This is maintenance release with mostly minor changes.
onestep model.toString() method producing a short description
of a mutation model. This is used in
pedtools::print.marker().