To cite nucim in publications please use:

Volker J. Schmid, Marion Cremer, Thomas Cremer. Quantitative analyses of the 3D nuclear landscape recorded with super-resolved fluorescence microscopy. Methods 123 (2017) 33-46. DOI 10.1016/j.ymeth.2017.03.013

To refer to the current version of the package you could use:

Volker J. Schmid (2018). nucim: Nucleome Imaging Toolbox. R package version 1.0.6. https://bioimaginggroup.github.io/nucim/

Corresponding BibTeX entries:

  @Article{,
    title = {Quantitative analyses of the 3D nuclear landscape recorded
      with super-resolved fluorescence microscopy},
    author = {Volker J. Schmid and Marion Cremer and Thomas Cremer},
    journal = {Methods},
    year = {2017},
    volume = {123},
    pages = {33-46},
    doi = {10.1016/j.ymeth.2017.03.013},
  }
  @Manual{,
    title = {{nucim}: Nucleome Imaging Toolbox},
    author = {Volker J. Schmid},
    year = {2018},
    note = {R package version 1.0.6},
    url = {https://bioimaginggroup.github.io/nucim/},
  }