cuperdec: Cumulative Percent Decay Curve Generator

Calculates and visualises cumulative percent 'decay' curves, which are typically calculated from metagenomic taxonomic profiles. These can be used to estimate the level of expected 'endogenous' taxa at different abundance levels retrieved from metagenomic samples, when comparing to samples of known sampling site or source.

Version: 1.0.0
Depends: R (≥ 3.5.0)
Imports: dplyr, ggplot2, magrittr, readr, rlang, tidyr
Suggests: knitr, rmarkdown, testthat
Published: 2021-04-07
Author: James A. Fellows Yates ORCID iD [aut, cre]
Maintainer: James A. Fellows Yates <jfy133 at>
License: MIT + file LICENSE
NeedsCompilation: no
Language: en-GB
Citation: cuperdec citation info
Materials: README NEWS
CRAN checks: cuperdec results


Reference manual: cuperdec.pdf
Vignettes: Introduction to cuperdec
Package source: cuperdec_1.0.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release: cuperdec_1.0.0.tgz, r-oldrel: cuperdec_1.0.0.tgz


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