actel: Acoustic Telemetry Data Analysis

Designed for studies where fish tagged with acoustic tags are expected to move through receiver arrays. This package combines the advantages of automatic sorting and checking of fish movements with the possibility for user intervention on tags that deviate from expected behaviour. The three analysis functions (explore(), migration() and residency()) allow the users to analyse their data in a systematic way, making it easy to compare results from different studies. CJS calculations are based on Perry et al. (2012) <https://www.researchgate.net/publication/256443823_Using_mark-recapture_models_to_estimate_survival_from_telemetry_data>.

Version: 1.0.0
Depends: R (≥ 3.6)
Imports: circular, data.table, DiagrammeR, DiagrammeRsvg, fasttime, fs, ggplot2, svglite, graphics, knitr, readr, reshape2, rmarkdown, rsvg, scales, stats, stringr, grDevices, utils
Suggests: raster, gdistance, sp, tools, rgdal, testthat, RGtk2, gWidgets2RGtk2, gWidgets2
Published: 2020-06-13
Author: Hugo Flávio ORCID iD [aut, cre]
Maintainer: Hugo Flávio <hdmfla at aqua.dtu.dk>
BugReports: https://github.com/hugomflavio/actel/issues
License: GPL-3
URL: https://github.com/hugomflavio/actel
NeedsCompilation: no
Language: en-GB
Materials: README NEWS
CRAN checks: actel results

Downloads:

Reference manual: actel.pdf
Vignettes: 1.0) Preparing your data
1.1) Structuring the study area
1.2) Creating a distances matrix
2.0) explore()
2.1) Processes behind explore()
2.2) Inspecting the explore() results
3.0) migration()
3.1) Processes behind migration()
3.2) Inspecting the migration() results
3.3) One-way efficiency estimations
4.0) residency()
4.1) Processes behind residency()
4.2) Inspecting the residency() results
4.3) Multi-way efficiency estimations
5.0) Manual mode
6.0) Beyond the three main analyses
7.0) Errors and messages
Package source: actel_1.0.0.tar.gz
Windows binaries: r-devel: actel_1.0.0.zip, r-release: actel_1.0.0.zip, r-oldrel: actel_1.0.0.zip
macOS binaries: r-release: actel_1.0.0.tgz, r-oldrel: actel_1.0.0.tgz

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