# TreatmentPatterns 2.6.1
- Bumped R version to 4.2.1
- Added additional unit-tests for
createSunburstPlot2() and createSankeyDiagram2()
- Updated to use DATEDIFF to compute difference between dates when fetching data from the database.
- Added functionality to choose how groups below the minimum cell count are censored.
- Made some parameters ambiguous for
createSankeyDiagram2 and createSunburstPlot2() for more control over the figures.
- Removed
addNoPath parameter.
- Renamed
minFreq parameter to minCellCount.
- Added Shiny app with exported module classes.
- Added censoring options of treatment pathways falling below the
minCellCount.
- Simplified part of
computePathways().
- Significantly improved performance of
export().
# TreatmentPatterns 2.6.0
- Added
createSunburstPlot2() as a replacement of createSunburstPlot(). createSunburstPlot2() will fully replace createSunburstPlot() in a future version.
- Moved
DatabaseConnector and SqlRender to Suggests
- Removed obsolete dependencies:
data.table, fs, and glue.
- Internal performance updates.
- Internal code style updates.
- Moved basic filtering when fetching cohort table.
- Updated ReadMe with functionalities
- Internal updates to LRFS paths, to allow paths of identical duration.
# TreatmentPatterns 2.5.2
- Resolved issue with finalize method of CDMInterface class.
- Resolved issue with schema references.
- Unified case style.
- Refactored code for
createSunburstPlot().
# TreatmentPatterns 2.5.1
- Added checks for user input:
cohorts and cohortTableName.
- Added option to directly return HTML when using
createSankeyDiagram.
- Added option to directly return HTML when using
createSunburstPlot.
- Added option for ageWindow to be a vector.
- Added input checking for
export().
- Added additional check for frequency for
createSunburstPlot.
- Resolved issue in
createSunburstPlot, when converting from data.table to nested JSON.
# TreatmentPatterns 2.5.0
- Updated interface
- Some internal OO usage
- CDM & DatabaseConnector
- Uses Andromeda to be able to handle bigger than RAM data sets.
- Shift from data.table to dplyr.
- Updated vignettes using new interface
- General code clean up
- Intermediate files are cached and accessable through Andromeda for review.
- Outputted CSV-files re-imagined to be more flexible for use post TreatmentPatterns.
- Sunburst and Sankey plots are now directly usable with treatmentPathways.csv.