TcGSA: Time-Course Gene Set Analysis

Implementation of Time-course Gene Set Analysis (TcGSA), a method for analyzing longitudinal gene-expression data at the gene set level.

Version: 0.11.1
Depends: R (≥ 3.0.2), ggplot2 (≥ 2.0.0)
Imports: lme4 (≥ 1.0-4), reshape2, GSA, multtest, cluster, cowplot, gplots, graphics, grDevices, gtools, stringr, splines, stats, utils
Suggests: foreach, parallel, doParallel, tcgsaseq, knitr, GEOquery, rmarkdown
Published: 2018-06-08
Author: Boris P. Hejblum [aut, cre], Damien Chimits [aut], Anthony Devaux [aut]
Maintainer: Boris P. Hejblum <boris.hejblum at u-bordeaux.fr>
BugReports: https://github.com/borishejblum/TcGSA/issues
License: GPL-2 | file LICENSE
NeedsCompilation: no
Citation: TcGSA citation info
Materials: README NEWS
CRAN checks: TcGSA results

Downloads:

Reference manual: TcGSA.pdf
Vignettes: TcGSA_userguide
Package source: TcGSA_0.11.1.tar.gz
Windows binaries: r-devel: TcGSA_0.11.1.zip, r-release: TcGSA_0.11.1.zip, r-oldrel: TcGSA_0.11.1.zip
OS X binaries: r-release: TcGSA_0.11.1.tgz, r-oldrel: TcGSA_0.11.1.tgz
Old sources: TcGSA archive

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