PEIMAN2: Post-Translational Modification Enrichment, Integration, and Matching Analysis

Functions and mined database from 'UniProt' focusing on post-translational modifications to do single enrichment analysis (SEA) and protein set enrichment analysis (PSEA). Payman Nickchi, Mehdi Mirzaie, Marc Baumann, Amir Ata Saei, Mohieddin Jafari (2022) <bioRxiv:10.1101/2022.11.09.515610>.

Version: 0.1.0
Depends: R (≥ 2.10), tidyverse
Imports: ggplot2, dplyr, glue, lifecycle, purrr, rlang, stringr, graphics, forcats, stats, magrittr
Suggests: knitr, rmarkdown, testthat (≥ 3.0.0)
Published: 2022-11-21
Author: Mohieddin Jafari [aut], Payman Nickchi [aut, cre]
Maintainer: Payman Nickchi <pnickchi at sfu.ca>
License: GPL (≥ 3)
NeedsCompilation: no
Citation: PEIMAN2 citation info
Materials: README
CRAN checks: PEIMAN2 results

Documentation:

Reference manual: PEIMAN2.pdf
Vignettes: PEIMAN2-vignette

Downloads:

Package source: PEIMAN2_0.1.0.tar.gz
Windows binaries: r-devel: PEIMAN2_0.1.0.zip, r-release: not available, r-oldrel: PEIMAN2_0.1.0.zip
macOS binaries: r-release (arm64): PEIMAN2_0.1.0.tgz, r-oldrel (arm64): PEIMAN2_0.1.0.tgz, r-release (x86_64): PEIMAN2_0.1.0.tgz, r-oldrel (x86_64): PEIMAN2_0.1.0.tgz

Linking:

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