OpenSpecy: Analyze, Process, Identify, and Share, Raman and (FT)IR Spectra

Raman and (FT)IR spectral analysis tool for plastic particles and other environmental samples. Supported features include reading spectral data files (.asp, .csv, .jdx, .spc, .spa, .0), Savitzky-Golay smoothing of spectral intensities with smooth_intens(), correcting background noise with subtr_bg() in accordance with Zhao et al. (2007) <doi:10.1366/000370207782597003>, and identifying spectra using an onboard reference library (Cowger et al. 2020, <doi:10.1177/0003702820929064>). Analyzed spectra can be shared with the Open Specy community. A Shiny app is available via run_app() or online at <https://wincowger.shinyapps.io/OpenSpecy/>.

Version: 0.9.1
Depends: R (≥ 4.0.0)
Imports: magrittr, rlang, dplyr, osfr, hyperSpec, hexView, digest, signal, shiny
Suggests: knitr, rmarkdown, testthat (≥ 3.0.0), config, shinyjs, shinythemes, shinyBS, shinyWidgets, ggplot2, plotly, data.table, DT, curl, rdrop2, mongolite, loggit
Published: 2021-04-11
Author: Win Cowger ORCID iD [cre, aut], Zacharias Steinmetz ORCID iD [aut], Andrew Gray ORCID iD [ctb], Hannah Hapich ORCID iD [ctb], Jennifer Lynch ORCID iD [ctb, dtc], Hannah De Frond ORCID iD [ctb, dtc], Keenan Munno ORCID iD [ctb, dtc], Chelsea Rochman ORCID iD [ctb, dtc], Sebastian Primpke ORCID iD [ctb, dtc], Orestis Herodotou [ctb, dtc]
Maintainer: Win Cowger <wincowger at gmail.com>
BugReports: https://github.com/wincowgerDEV/OpenSpecy/issues
License: CC BY 4.0
URL: https://github.com/wincowgerDEV/OpenSpecy
NeedsCompilation: no
Materials: README NEWS
CRAN checks: OpenSpecy results

Downloads:

Reference manual: OpenSpecy.pdf
Vignettes: Standard Operating Procedure
Package source: OpenSpecy_0.9.1.tar.gz
Windows binaries: r-devel: OpenSpecy_0.9.1.zip, r-release: OpenSpecy_0.9.1.zip, r-oldrel: not available
macOS binaries: r-release: OpenSpecy_0.9.1.tgz, r-oldrel: not available
Old sources: OpenSpecy archive

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