ActivePathways: Multivariate Pathway Enrichment Analysis

An integrative method of analyzing multi omics data that conducts enrichment analysis of annotated gene sets. 'ActivePathways' uses a statistical data fusion approach, rationalizes contributing evidence and highlights associated genes, improving systems-level understanding of cellular organization in health and disease.

Version: 1.0.1
Depends: R (≥ 3.2.3)
Imports: metap, data.table, ggplot2
Suggests: testthat, knitr, rmarkdown
Published: 2019-05-04
Author: Helen Zhu [aut, cre], Juri Reimand [aut], Jonathan Barenboim [aut]
Maintainer: Helen Zhu <helen.zhu at oicr.on.ca>
BugReports: https://github.com/reimandlab/ActivePathways/issues
License: GPL-3
NeedsCompilation: no
Materials: NEWS
CRAN checks: ActivePathways results

Downloads:

Reference manual: ActivePathways.pdf
Vignettes: ActivePathways
enrichmentMap
Package source: ActivePathways_1.0.1.tar.gz
Windows binaries: r-devel: ActivePathways_1.0.1.zip, r-devel-gcc8: ActivePathways_1.0.1.zip, r-release: ActivePathways_1.0.1.zip, r-oldrel: ActivePathways_1.0.1.zip
OS X binaries: r-release: ActivePathways_1.0.1.tgz, r-oldrel: ActivePathways_1.0.1.tgz

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