Last updated on 2023-05-28 00:56:24 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.0 | 129.25 | 1282.03 | 1411.28 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.1.0 | 121.95 | 242.17 | 364.12 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 0.1.0 | 400.66 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.0 | 639.75 | NOTE | |||
| r-devel-windows-x86_64 | 0.1.0 | 111.00 | 404.00 | 515.00 | NOTE | |
| r-patched-linux-x86_64 | 0.1.0 | 111.55 | 1284.55 | 1396.10 | ERROR | |
| r-release-linux-x86_64 | 0.1.0 | 93.62 | 1283.48 | 1377.10 | ERROR | |
| r-release-macos-arm64 | 0.1.0 | 143.00 | NOTE | |||
| r-release-macos-x86_64 | 0.1.0 | 211.00 | NOTE | |||
| r-release-windows-x86_64 | 0.1.0 | 142.00 | 275.00 | 417.00 | NOTE | |
| r-oldrel-macos-arm64 | 0.1.0 | 140.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 0.1.0 | 152.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 0.1.0 | 124.00 | 275.00 | 399.00 | NOTE |
Version: 0.1.0
Check: for GNU extensions in Makefiles
Result: NOTE
GNU make is a SystemRequirements.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [20m/24m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(phacking)
>
> test_check("phacking")
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 1).
Chain 1:
Chain 1: Gradient evaluation took 0.000363 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 3.63 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1:
Chain 1:
Chain 1: Iteration: 1 / 2000 [ 0%] (Warmup)
Chain 1: Iteration: 200 / 2000 [ 10%] (Warmup)
Chain 1: Iteration: 400 / 2000 [ 20%] (Warmup)
Chain 1: Iteration: 600 / 2000 [ 30%] (Warmup)
Chain 1: Iteration: 800 / 2000 [ 40%] (Warmup)
Chain 1: Iteration: 1000 / 2000 [ 50%] (Warmup)
Chain 1: Iteration: 1001 / 2000 [ 50%] (Sampling)
Chain 1: Iteration: 1200 / 2000 [ 60%] (Sampling)
Chain 1: Iteration: 1400 / 2000 [ 70%] (Sampling)
Chain 1: Iteration: 1600 / 2000 [ 80%] (Sampling)
Chain 1: Iteration: 1800 / 2000 [ 90%] (Sampling)
Chain 1: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 1:
Chain 1: Elapsed Time: 0.966 seconds (Warm-up)
Chain 1: 0.846 seconds (Sampling)
Chain 1: 1.812 seconds (Total)
Chain 1:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 2).
Chain 2:
Chain 2: Gradient evaluation took 0.000373 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 3.73 seconds.
Chain 2: Adjust your expectations accordingly!
Chain 2:
Chain 2:
Chain 2: Iteration: 1 / 2000 [ 0%] (Warmup)
Chain 2: Iteration: 200 / 2000 [ 10%] (Warmup)
Chain 2: Iteration: 400 / 2000 [ 20%] (Warmup)
Chain 2: Iteration: 600 / 2000 [ 30%] (Warmup)
Chain 2: Iteration: 800 / 2000 [ 40%] (Warmup)
Chain 2: Iteration: 1000 / 2000 [ 50%] (Warmup)
Chain 2: Iteration: 1001 / 2000 [ 50%] (Sampling)
Chain 2: Iteration: 1200 / 2000 [ 60%] (Sampling)
Chain 2: Iteration: 1400 / 2000 [ 70%] (Sampling)
Chain 2: Iteration: 1600 / 2000 [ 80%] (Sampling)
Chain 2: Iteration: 1800 / 2000 [ 90%] (Sampling)
Chain 2: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 2:
Chain 2: Elapsed Time: 0.887 seconds (Warm-up)
Chain 2: 0.954 seconds (Sampling)
Chain 2: 1.841 seconds (Total)
Chain 2:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 3).
Chain 3:
Chain 3: Gradient evaluation took 0.000298 seconds
Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 2.98 seconds.
Chain 3: Adjust your expectations accordingly!
Chain 3:
Chain 3:
Chain 3: Iteration: 1 / 2000 [ 0%] (Warmup)
Chain 3: Iteration: 200 / 2000 [ 10%] (Warmup)
Chain 3: Iteration: 400 / 2000 [ 20%] (Warmup)
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Chain 3: Iteration: 1000 / 2000 [ 50%] (Warmup)
Chain 3: Iteration: 1001 / 2000 [ 50%] (Sampling)
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Chain 3: Iteration: 1600 / 2000 [ 80%] (Sampling)
Chain 3: Iteration: 1800 / 2000 [ 90%] (Sampling)
Chain 3: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 3:
Chain 3: Elapsed Time: 0.968 seconds (Warm-up)
Chain 3: 0.871 seconds (Sampling)
Chain 3: 1.839 seconds (Total)
Chain 3:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 4).
Chain 4:
Chain 4: Gradient evaluation took 0.00023 seconds
Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 2.3 seconds.
Chain 4: Adjust your expectations accordingly!
Chain 4:
Chain 4:
Chain 4: Iteration: 1 / 2000 [ 0%] (Warmup)
Chain 4: Iteration: 200 / 2000 [ 10%] (Warmup)
Chain 4: Iteration: 400 / 2000 [ 20%] (Warmup)
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Chain 4: Iteration: 800 / 2000 [ 40%] (Warmup)
Chain 4: Iteration: 1000 / 2000 [ 50%] (Warmup)
Chain 4: Iteration: 1001 / 2000 [ 50%] (Sampling)
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Chain 4: Iteration: 1400 / 2000 [ 70%] (Sampling)
Chain 4: Iteration: 1600 / 2000 [ 80%] (Sampling)
Chain 4: Iteration: 1800 / 2000 [ 90%] (Sampling)
Chain 4: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 4:
Chain 4: Elapsed Time: 0.896 seconds (Warm-up)
Chain 4: 0.736 seconds (Sampling)
Chain 4: 1.632 seconds (Total)
Chain 4:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 1).
Chain 1:
Chain 1: Gradient evaluation took 0.00028 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 2.8 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1:
Chain 1:
Chain 1: Iteration: 1 / 2000 [ 0%] (Warmup)
Chain 1: Iteration: 200 / 2000 [ 10%] (Warmup)
Chain 1: Iteration: 400 / 2000 [ 20%] (Warmup)
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Chain 1: Iteration: 800 / 2000 [ 40%] (Warmup)
Chain 1: Iteration: 1000 / 2000 [ 50%] (Warmup)
Chain 1: Iteration: 1001 / 2000 [ 50%] (Sampling)
Chain 1: Iteration: 1200 / 2000 [ 60%] (Sampling)
Chain 1: Iteration: 1400 / 2000 [ 70%] (Sampling)
Chain 1: Iteration: 1600 / 2000 [ 80%] (Sampling)
Chain 1: Iteration: 1800 / 2000 [ 90%] (Sampling)
Chain 1: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 1:
Chain 1: Elapsed Time: 1.84 seconds (Warm-up)
Chain 1: 1.374 seconds (Sampling)
Chain 1: 3.214 seconds (Total)
Chain 1:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 2).
Chain 2:
Chain 2: Gradient evaluation took 0.000247 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 2.47 seconds.
Chain 2: Adjust your expectations accordingly!
Chain 2:
Chain 2:
Chain 2: Iteration: 1 / 2000 [ 0%] (Warmup)
Chain 2: Iteration: 200 / 2000 [ 10%] (Warmup)
Chain 2: Iteration: 400 / 2000 [ 20%] (Warmup)
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Chain 2: Iteration: 800 / 2000 [ 40%] (Warmup)
Chain 2: Iteration: 1000 / 2000 [ 50%] (Warmup)
Chain 2: Iteration: 1001 / 2000 [ 50%] (Sampling)
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Chain 2: Iteration: 1400 / 2000 [ 70%] (Sampling)
Chain 2: Iteration: 1600 / 2000 [ 80%] (Sampling)
Chain 2: Iteration: 1800 / 2000 [ 90%] (Sampling)
Chain 2: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 2:
Chain 2: Elapsed Time: 1.499 seconds (Warm-up)
Chain 2: 1.341 seconds (Sampling)
Chain 2: 2.84 seconds (Total)
Chain 2:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 3).
Chain 3:
Chain 3: Gradient evaluation took 0.000218 seconds
Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 2.18 seconds.
Chain 3: Adjust your expectations accordingly!
Chain 3:
Chain 3:
Chain 3: Iteration: 1 / 2000 [ 0%] (Warmup)
Chain 3: Iteration: 200 / 2000 [ 10%] (Warmup)
Chain 3: Iteration: 400 / 2000 [ 20%] (Warmup)
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Chain 3: Iteration: 800 / 2000 [ 40%] (Warmup)
Chain 3: Iteration: 1000 / 2000 [ 50%] (Warmup)
Chain 3: Iteration: 1001 / 2000 [ 50%] (Sampling)
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Chain 3: Iteration: 1400 / 2000 [ 70%] (Sampling)
Chain 3: Iteration: 1600 / 2000 [ 80%] (Sampling)
Chain 3: Iteration: 1800 / 2000 [ 90%] (Sampling)
Chain 3: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 3:
Chain 3: Elapsed Time: 1.901 seconds (Warm-up)
Chain 3: 1.76 seconds (Sampling)
Chain 3: 3.661 seconds (Total)
Chain 3:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 4).
Chain 4:
Chain 4: Gradient evaluation took 0.000189 seconds
Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 1.89 seconds.
Chain 4: Adjust your expectations accordingly!
Chain 4:
Chain 4:
Chain 4: Iteration: 1 / 2000 [ 0%] (Warmup)
Chain 4: Iteration: 200 / 2000 [ 10%] (Warmup)
Chain 4: Iteration: 400 / 2000 [ 20%] (Warmup)
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Chain 4: Iteration: 800 / 2000 [ 40%] (Warmup)
Chain 4: Iteration: 1000 / 2000 [ 50%] (Warmup)
Chain 4: Iteration: 1001 / 2000 [ 50%] (Sampling)
Chain 4: Iteration: 1200 / 2000 [ 60%] (Sampling)
Chain 4: Iteration: 1400 / 2000 [ 70%] (Sampling)
Chain 4: Iteration: 1600 / 2000 [ 80%] (Sampling)
Chain 4: Iteration: 1800 / 2000 [ 90%] (Sampling)
Chain 4: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 4:
Chain 4: Elapsed Time: 1.588 seconds (Warm-up)
Chain 4: 1.363 seconds (Sampling)
Chain 4: 2.951 seconds (Total)
Chain 4:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 1).
Chain 1:
Chain 1: Gradient evaluation took 3.2e-05 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.32 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1:
Chain 1:
Chain 1: Iteration: 1 / 2000 [ 0%] (Warmup)
Chain 1: Iteration: 200 / 2000 [ 10%] (Warmup)
Chain 1: Iteration: 400 / 2000 [ 20%] (Warmup)
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Chain 1: Iteration: 1000 / 2000 [ 50%] (Warmup)
Chain 1: Iteration: 1001 / 2000 [ 50%] (Sampling)
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Chain 1: Iteration: 1400 / 2000 [ 70%] (Sampling)
Chain 1: Iteration: 1600 / 2000 [ 80%] (Sampling)
Chain 1: Iteration: 1800 / 2000 [ 90%] (Sampling)
Chain 1: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 1:
Chain 1: Elapsed Time: 77.653 seconds (Warm-up)
Chain 1: 0.162 seconds (Sampling)
Chain 1: 77.815 seconds (Total)
Chain 1:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 2).
Chain 2:
Chain 2: Gradient evaluation took 3.8e-05 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.38 seconds.
Chain 2: Adjust your expectations accordingly!
Chain 2:
Chain 2:
Chain 2: Iteration: 1 / 2000 [ 0%] (Warmup)
Chain 2: Iteration: 200 / 2000 [ 10%] (Warmup)
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Chain 2: Iteration: 1001 / 2000 [ 50%] (Sampling)
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Chain 2: Iteration: 1600 / 2000 [ 80%] (Sampling)
Chain 2: Iteration: 1800 / 2000 [ 90%] (Sampling)
Chain 2: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 2:
Chain 2: Elapsed Time: 0.204 seconds (Warm-up)
Chain 2: 0.124 seconds (Sampling)
Chain 2: 0.328 seconds (Total)
Chain 2:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 3).
Chain 3:
Chain 3: Gradient evaluation took 3.6e-05 seconds
Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 0.36 seconds.
Chain 3: Adjust your expectations accordingly!
Chain 3:
Chain 3:
Chain 3: Iteration: 1 / 2000 [ 0%] (Warmup)
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Chain 3: Iteration: 1800 / 2000 [ 90%] (Sampling)
Chain 3: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 3:
Chain 3: Elapsed Time: 1.978 seconds (Warm-up)
Chain 3: 0.538 seconds (Sampling)
Chain 3: 2.516 seconds (Total)
Chain 3:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 4).
Chain 4:
Chain 4: Gradient evaluation took 3e-05 seconds
Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 0.3 seconds.
Chain 4: Adjust your expectations accordingly!
Chain 4:
Chain 4:
Chain 4: Iteration: 1 / 2000 [ 0%] (Warmup)
Chain 4: Iteration: 200 / 2000 [ 10%] (Warmup)
Killed
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.1.0
Check: dependencies in R code
Result: NOTE
Namespaces in Imports field not imported from:
‘RcppParallel’ ‘rstantools’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [20m/23m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(phacking)
>
> test_check("phacking")
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 1).
Chain 1:
Chain 1: Gradient evaluation took 0.000394 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 3.94 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1:
Chain 1:
Chain 1: Iteration: 1 / 2000 [ 0%] (Warmup)
Chain 1: Iteration: 200 / 2000 [ 10%] (Warmup)
Chain 1: Iteration: 400 / 2000 [ 20%] (Warmup)
Chain 1: Iteration: 600 / 2000 [ 30%] (Warmup)
Chain 1: Iteration: 800 / 2000 [ 40%] (Warmup)
Chain 1: Iteration: 1000 / 2000 [ 50%] (Warmup)
Chain 1: Iteration: 1001 / 2000 [ 50%] (Sampling)
Chain 1: Iteration: 1200 / 2000 [ 60%] (Sampling)
Chain 1: Iteration: 1400 / 2000 [ 70%] (Sampling)
Chain 1: Iteration: 1600 / 2000 [ 80%] (Sampling)
Chain 1: Iteration: 1800 / 2000 [ 90%] (Sampling)
Chain 1: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 1:
Chain 1: Elapsed Time: 1.614 seconds (Warm-up)
Chain 1: 1.214 seconds (Sampling)
Chain 1: 2.828 seconds (Total)
Chain 1:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 2).
Chain 2:
Chain 2: Gradient evaluation took 0.00035 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 3.5 seconds.
Chain 2: Adjust your expectations accordingly!
Chain 2:
Chain 2:
Chain 2: Iteration: 1 / 2000 [ 0%] (Warmup)
Chain 2: Iteration: 200 / 2000 [ 10%] (Warmup)
Chain 2: Iteration: 400 / 2000 [ 20%] (Warmup)
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Chain 2: Iteration: 1000 / 2000 [ 50%] (Warmup)
Chain 2: Iteration: 1001 / 2000 [ 50%] (Sampling)
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Chain 2: Iteration: 1800 / 2000 [ 90%] (Sampling)
Chain 2: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 2:
Chain 2: Elapsed Time: 1.397 seconds (Warm-up)
Chain 2: 1.038 seconds (Sampling)
Chain 2: 2.435 seconds (Total)
Chain 2:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 3).
Chain 3:
Chain 3: Gradient evaluation took 0.000277 seconds
Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 2.77 seconds.
Chain 3: Adjust your expectations accordingly!
Chain 3:
Chain 3:
Chain 3: Iteration: 1 / 2000 [ 0%] (Warmup)
Chain 3: Iteration: 200 / 2000 [ 10%] (Warmup)
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Chain 3: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 3:
Chain 3: Elapsed Time: 1.274 seconds (Warm-up)
Chain 3: 1.02 seconds (Sampling)
Chain 3: 2.294 seconds (Total)
Chain 3:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 4).
Chain 4:
Chain 4: Gradient evaluation took 0.000365 seconds
Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 3.65 seconds.
Chain 4: Adjust your expectations accordingly!
Chain 4:
Chain 4:
Chain 4: Iteration: 1 / 2000 [ 0%] (Warmup)
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Chain 4:
Chain 4: Elapsed Time: 1.46 seconds (Warm-up)
Chain 4: 1.17 seconds (Sampling)
Chain 4: 2.63 seconds (Total)
Chain 4:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 1).
Chain 1:
Chain 1: Gradient evaluation took 0.000358 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 3.58 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1:
Chain 1:
Chain 1: Iteration: 1 / 2000 [ 0%] (Warmup)
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Chain 1: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 1:
Chain 1: Elapsed Time: 2.402 seconds (Warm-up)
Chain 1: 2.939 seconds (Sampling)
Chain 1: 5.341 seconds (Total)
Chain 1:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 2).
Chain 2:
Chain 2: Gradient evaluation took 0.000279 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 2.79 seconds.
Chain 2: Adjust your expectations accordingly!
Chain 2:
Chain 2:
Chain 2: Iteration: 1 / 2000 [ 0%] (Warmup)
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Chain 2:
Chain 2: Elapsed Time: 2.452 seconds (Warm-up)
Chain 2: 2.882 seconds (Sampling)
Chain 2: 5.334 seconds (Total)
Chain 2:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 3).
Chain 3:
Chain 3: Gradient evaluation took 0.00035 seconds
Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 3.5 seconds.
Chain 3: Adjust your expectations accordingly!
Chain 3:
Chain 3:
Chain 3: Iteration: 1 / 2000 [ 0%] (Warmup)
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Chain 3:
Chain 3: Elapsed Time: 2.661 seconds (Warm-up)
Chain 3: 2.288 seconds (Sampling)
Chain 3: 4.949 seconds (Total)
Chain 3:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 4).
Chain 4:
Chain 4: Gradient evaluation took 0.00032 seconds
Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 3.2 seconds.
Chain 4: Adjust your expectations accordingly!
Chain 4:
Chain 4:
Chain 4: Iteration: 1 / 2000 [ 0%] (Warmup)
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Chain 4:
Chain 4: Elapsed Time: 2.646 seconds (Warm-up)
Chain 4: 3.072 seconds (Sampling)
Chain 4: 5.718 seconds (Total)
Chain 4:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 1).
Chain 1:
Chain 1: Gradient evaluation took 4.7e-05 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.47 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1:
Chain 1:
Chain 1: Iteration: 1 / 2000 [ 0%] (Warmup)
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Chain 1:
Chain 1: Elapsed Time: 0.32 seconds (Warm-up)
Chain 1: 0.294 seconds (Sampling)
Chain 1: 0.614 seconds (Total)
Chain 1:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 2).
Chain 2:
Chain 2: Gradient evaluation took 3.1e-05 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.31 seconds.
Chain 2: Adjust your expectations accordingly!
Chain 2:
Chain 2:
Chain 2: Iteration: 1 / 2000 [ 0%] (Warmup)
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Chain 2:
Chain 2: Elapsed Time: 3.16 seconds (Warm-up)
Chain 2: 0.381 seconds (Sampling)
Chain 2: 3.541 seconds (Total)
Chain 2:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 3).
Chain 3:
Chain 3: Gradient evaluation took 3.4e-05 seconds
Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 0.34 seconds.
Chain 3: Adjust your expectations accordingly!
Chain 3:
Chain 3:
Chain 3: Iteration: 1 / 2000 [ 0%] (Warmup)
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Chain 3:
Chain 3: Elapsed Time: 3.728 seconds (Warm-up)
Chain 3: 2.266 seconds (Sampling)
Chain 3: 5.994 seconds (Total)
Chain 3:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 4).
Chain 4:
Chain 4: Gradient evaluation took 3.2e-05 seconds
Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 0.32 seconds.
Chain 4: Adjust your expectations accordingly!
Chain 4:
Chain 4:
Chain 4: Iteration: 1 / 2000 [ 0%] (Warmup)
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Killed
Flavor: r-patched-linux-x86_64
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [20m/23m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(phacking)
>
> test_check("phacking")
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 1).
Chain 1:
Chain 1: Gradient evaluation took 0.000407 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 4.07 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1:
Chain 1:
Chain 1: Iteration: 1 / 2000 [ 0%] (Warmup)
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Chain 1: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 1:
Chain 1: Elapsed Time: 1.445 seconds (Warm-up)
Chain 1: 1.326 seconds (Sampling)
Chain 1: 2.771 seconds (Total)
Chain 1:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 2).
Chain 2:
Chain 2: Gradient evaluation took 0.000283 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 2.83 seconds.
Chain 2: Adjust your expectations accordingly!
Chain 2:
Chain 2:
Chain 2: Iteration: 1 / 2000 [ 0%] (Warmup)
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Chain 2: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 2:
Chain 2: Elapsed Time: 1.376 seconds (Warm-up)
Chain 2: 0.935 seconds (Sampling)
Chain 2: 2.311 seconds (Total)
Chain 2:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 3).
Chain 3:
Chain 3: Gradient evaluation took 0.000289 seconds
Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 2.89 seconds.
Chain 3: Adjust your expectations accordingly!
Chain 3:
Chain 3:
Chain 3: Iteration: 1 / 2000 [ 0%] (Warmup)
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Chain 3: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 3:
Chain 3: Elapsed Time: 1.342 seconds (Warm-up)
Chain 3: 1.249 seconds (Sampling)
Chain 3: 2.591 seconds (Total)
Chain 3:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 4).
Chain 4:
Chain 4: Gradient evaluation took 0.000365 seconds
Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 3.65 seconds.
Chain 4: Adjust your expectations accordingly!
Chain 4:
Chain 4:
Chain 4: Iteration: 1 / 2000 [ 0%] (Warmup)
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Chain 4: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 4:
Chain 4: Elapsed Time: 1.214 seconds (Warm-up)
Chain 4: 1.193 seconds (Sampling)
Chain 4: 2.407 seconds (Total)
Chain 4:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 1).
Chain 1:
Chain 1: Gradient evaluation took 0.000366 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 3.66 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1:
Chain 1:
Chain 1: Iteration: 1 / 2000 [ 0%] (Warmup)
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Chain 1:
Chain 1: Elapsed Time: 2.266 seconds (Warm-up)
Chain 1: 1.967 seconds (Sampling)
Chain 1: 4.233 seconds (Total)
Chain 1:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 2).
Chain 2:
Chain 2: Gradient evaluation took 0.000288 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 2.88 seconds.
Chain 2: Adjust your expectations accordingly!
Chain 2:
Chain 2:
Chain 2: Iteration: 1 / 2000 [ 0%] (Warmup)
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Chain 2:
Chain 2: Elapsed Time: 3.118 seconds (Warm-up)
Chain 2: 2.389 seconds (Sampling)
Chain 2: 5.507 seconds (Total)
Chain 2:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 3).
Chain 3:
Chain 3: Gradient evaluation took 0.00024 seconds
Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 2.4 seconds.
Chain 3: Adjust your expectations accordingly!
Chain 3:
Chain 3:
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Chain 3:
Chain 3: Elapsed Time: 2.045 seconds (Warm-up)
Chain 3: 1.947 seconds (Sampling)
Chain 3: 3.992 seconds (Total)
Chain 3:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 4).
Chain 4:
Chain 4: Gradient evaluation took 0.000309 seconds
Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 3.09 seconds.
Chain 4: Adjust your expectations accordingly!
Chain 4:
Chain 4:
Chain 4: Iteration: 1 / 2000 [ 0%] (Warmup)
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Chain 4:
Chain 4: Elapsed Time: 2.174 seconds (Warm-up)
Chain 4: 2.161 seconds (Sampling)
Chain 4: 4.335 seconds (Total)
Chain 4:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 1).
Chain 1:
Chain 1: Gradient evaluation took 3.2e-05 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.32 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1:
Chain 1:
Chain 1: Iteration: 1 / 2000 [ 0%] (Warmup)
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Chain 1: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 1:
Chain 1: Elapsed Time: 0.357 seconds (Warm-up)
Chain 1: 0.197 seconds (Sampling)
Chain 1: 0.554 seconds (Total)
Chain 1:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 2).
Chain 2:
Chain 2: Gradient evaluation took 3.5e-05 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.35 seconds.
Chain 2: Adjust your expectations accordingly!
Chain 2:
Chain 2:
Chain 2: Iteration: 1 / 2000 [ 0%] (Warmup)
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Chain 2: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 2:
Chain 2: Elapsed Time: 0.993 seconds (Warm-up)
Chain 2: 0.577 seconds (Sampling)
Chain 2: 1.57 seconds (Total)
Chain 2:
SAMPLING FOR MODEL 'phacking_rtma' NOW (CHAIN 3).
Chain 3:
Chain 3: Gradient evaluation took 2.6e-05 seconds
Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 0.26 seconds.
Chain 3: Adjust your expectations accordingly!
Chain 3:
Chain 3:
Chain 3: Iteration: 1 / 2000 [ 0%] (Warmup)
Chain 3: Iteration: 200 / 2000 [ 10%] (Warmup)
Killed
Flavor: r-release-linux-x86_64
Version: 0.1.0
Check: installed package size
Result: NOTE
installed size is 34.7Mb
sub-directories of 1Mb or more:
libs 34.4Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64