CRAN Package Check Results for Package hpoPlot

Last updated on 2020-04-04 03:51:21 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.4 5.46 62.73 68.19 OK
r-devel-linux-x86_64-debian-gcc 2.4 4.68 49.70 54.38 OK
r-devel-linux-x86_64-fedora-clang 2.4 81.71 OK
r-devel-linux-x86_64-fedora-gcc 2.4 83.63 OK
r-devel-windows-ix86+x86_64 2.4 14.00 70.00 84.00 ERROR
r-devel-windows-ix86+x86_64-gcc8 2.4 11.00 66.00 77.00 ERROR
r-patched-linux-x86_64 2.4 5.64 60.42 66.06 OK
r-patched-solaris-x86 2.4 125.40 OK
r-release-linux-x86_64 2.4 4.53 56.80 61.33 OK
r-release-windows-ix86+x86_64 2.4 11.00 82.00 93.00 OK
r-release-osx-x86_64 2.4 OK
r-oldrel-windows-ix86+x86_64 2.4 9.00 72.00 81.00 OK
r-oldrel-osx-x86_64 2.4 OK

Check Details

Version: 2.4
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: multiple methods tables found for 'plot'
Flavors: r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8

Version: 2.4
Check: examples
Result: ERROR
    Running examples in 'hpoPlot-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: hpo.plot
    > ### Title: Plot HPO graph object
    > ### Aliases: hpo.plot
    >
    > ### ** Examples
    >
    > data(hpo.terms)
    > hpo.plot(
    + hpo.terms=hpo.terms,
    + terms=get.ancestors(hpo.terms,
    + c("HP:0001382","HP:0004272","HP:0007917","HP:0004912","HP:0001596"))
    + )
    Error in as.double(y) :
     cannot coerce type 'S4' to vector of type 'double'
    Calls: hpo.plot -> plot -> plot -> plot.default -> xy.coords
    Execution halted
Flavors: r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8

Version: 2.4
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building 'hpoPlot-guide.Rmd' using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     The vignette engine knitr::rmarkdown is not available, because the rmarkdown package is not installed. Please install it.
    Quitting from lines 23-24 (hpoPlot-guide.Rmd)
    Error: processing vignette 'hpoPlot-guide.Rmd' failed with diagnostics:
    cannot coerce type 'S4' to vector of type 'double'
    --- failed re-building 'hpoPlot-guide.Rmd'
    
    SUMMARY: processing the following file failed:
     'hpoPlot-guide.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8