CRAN Package Check Results for Package fst

Last updated on 2019-08-24 03:48:07 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.9.0 104.42 70.32 174.74 NOTE
r-devel-linux-x86_64-debian-gcc 0.9.0 70.75 52.21 122.96 NOTE
r-devel-linux-x86_64-fedora-clang 0.9.0 264.22 NOTE
r-devel-linux-x86_64-fedora-gcc 0.9.0 219.07 NOTE
r-devel-windows-ix86+x86_64 0.9.0 181.00 256.00 437.00 OK
r-patched-linux-x86_64 0.9.0 78.41 67.19 145.60 OK
r-patched-solaris-x86 0.9.0 214.70 ERROR
r-release-linux-x86_64 0.9.0 77.50 66.87 144.37 OK
r-release-windows-ix86+x86_64 0.9.0 293.00 250.00 543.00 OK
r-release-osx-x86_64 0.9.0 NOTE
r-oldrel-windows-ix86+x86_64 0.9.0 265.00 156.00 421.00 OK
r-oldrel-osx-x86_64 0.9.0 NOTE

Additional issues

rchk

Check Details

Version: 0.9.0
Check: for non-standard things in the check directory
Result: NOTE
    Found the following files/directories:
     'dataset.fst'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.9.0
Check: installed package size
Result: NOTE
     installed size is 5.9Mb
     sub-directories of 1Mb or more:
     libs 5.7Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.9.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [0m/180m]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     >
     > library(testthat)
     > library(fst)
     > library(data.table)
     > library(lintr)
     > library(bit64)
     Loading required package: bit
     Attaching package bit
     package:bit (c) 2008-2012 Jens Oehlschlaegel (GPL-2)
     creators: bit bitwhich
     coercion: as.logical as.integer as.bit as.bitwhich which
     operator: ! & | xor != ==
     querying: print length any all min max range sum summary
     bit access: length<- [ [<- [[ [[<-
     for more help type ?bit
    
     Attaching package: 'bit'
    
     The following object is masked from 'package:data.table':
    
     setattr
    
     The following object is masked from 'package:base':
    
     xor
    
     Attaching package bit64
     package:bit64 (c) 2011-2012 Jens Oehlschlaegel
     creators: integer64 seq :
     coercion: as.integer64 as.vector as.logical as.integer as.double as.character as.bin
     logical operator: ! & | xor != == < <= >= >
     arithmetic operator: + - * / %/% %% ^
     math: sign abs sqrt log log2 log10
     math: floor ceiling trunc round
     querying: is.integer64 is.vector [is.atomic} [length] format print str
     values: is.na is.nan is.finite is.infinite
     aggregation: any all min max range sum prod
     cumulation: diff cummin cummax cumsum cumprod
     access: length<- [ [<- [[ [[<-
     combine: c rep cbind rbind as.data.frame
     WARNING don't use as subscripts
     WARNING semantics differ from integer
     for more help type ?bit64
    
     Attaching package: 'bit64'
    
     The following object is masked from 'package:bit':
    
     still.identical
    
     The following objects are masked from 'package:base':
    
     %in%, :, is.double, match, order, rank
    
     >
     > source("testthat/helper_fstwrite.R") # cross-version testing
     >
     > test_check("fst")
     ── 1. Failure: Medium factor with a single NA level (@test_factor.R#130) ──────
     `dt` not equal to `data`.
     Component "A": Mean relative difference: 0.8629941
    
     ── 2. Failure: Medium factor with a single NA level (@test_factor.R#130) ──────
     to_frame(dt[offset:nrow(dt), , drop = FALSE]) not equal to `data`.
     Component "A": Mean relative difference: 0.8629941
    
     ── 3. Failure: Medium factor with a single NA level (@test_factor.R#130) ──────
     to_frame(dt[1:(nrow(dt) - cap), , drop = FALSE]) not equal to `data`.
     Component "A": Mean relative difference: 0.8629941
    
     ── 4. Failure: Medium factor with a single NA level (@test_factor.R#130) ──────
     to_frame(dt[offset:(nrow(dt) - cap), , drop = FALSE]) not equal to `data`.
     Component "A": Mean relative difference: 0.8629941
    
     ── 5. Failure: Single uncompressed vectors (@test_fst.R#105) ──────────────────
     `sub_dt` not equal to `data`.
     Component "Xint": Mean relative difference: 1.38355
     args: col: Xint | from: 1 | to: 10000 | setColumns: | compress: 0 | tot_length 10000 cols sub_dt: 1 , rows sub_dt: 10000 cols data: 1 , rows data: 10000 head sub_dt: 1,2,3,4,5,6,7,8,9,10 head data: 1,2,3,4,5,6,7,8,9,10 unequals: 5888 uneq rows sub_dt1 17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41 uneq rows sub_dt2 17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41 uneq rows sub_dt3 4113,4114,4115,4116,4117,4118,4119,4120,4121,4122,4123,4124,4125,4126,4127,4128,4129,4130,4131,4132,4133,4134,4135,4136,4137
    
     ── 6. Failure: Single uncompressed vectors (@test_fst.R#105) ──────────────────
     `sub_dt` not equal to `data`.
     Component "Ylog": 'is.NA' value mismatch: 3391 in current 3397 in target
     args: col: Ylog | from: 1 | to: 10000 | setColumns: | compress: 0 | tot_length 10000 cols sub_dt: 1 , rows sub_dt: 10000 cols data: 1 , rows data: 10000 head sub_dt: FALSE,FALSE,FALSE,NA,FALSE,TRUE,NA,TRUE,NA,TRUE head data: NA,FALSE,NA,FALSE,TRUE,NA,TRUE,NA,FALSE,FALSE unequals: NA uneq rows sub_dt1 NA,NA,NA,FALSE,NA,NA,NA,NA,TRUE,NA,TRUE,NA,NA,NA,TRUE,NA,TRUE,NA,NA,NA,NA,NA,FALSE,NA,NA uneq rows sub_dt2 NA,NA,NA,5,NA,NA,NA,NA,10,NA,12,NA,NA,NA,18,NA,20,NA,NA,NA,NA,NA,28,NA,NA uneq rows sub_dt3 NA,NA,NA,TRUE,NA,NA,NA,NA,FALSE,NA,FALSE,NA,NA,NA,FALSE,NA,FALSE,NA,NA,NA,NA,NA,TRUE,NA,NA
    
     ── 7. Failure: Single uncompressed vectors (@test_fst.R#105) ──────────────────
     `sub_dt` not equal to `data`.
     Component "Zdoub": Mean relative difference: 1.414641
     args: col: Zdoub | from: 1 | to: 10000 | setColumns: | compress: 0 | tot_length 10000 cols sub_dt: 1 , rows sub_dt: 10000 cols data: 1 , rows data: 10000 head sub_dt: 1.34444143528379,-0.469272363060993,1.56782515132094,1.20806043654825,-1.37715386886903,-0.0200274793379038,0.210392607725347,-0.81401910857235,-0.229814075107102,0.249155961519311 head data: 1.34444143528379,-0.469272363060993,1.56782515132094,1.20806043654825,-1.37715386886903,-0.0200274793379038,0.210392607725347,-0.81401910857235,-0.229814075107102,0.249155961519311 unequals: 4096 uneq rows sub_dt1 -1.37202725834313,-1.09560972056455,-1.03385008303338,-0.450403348511007,2.24873235748377,-0.212867130176465,-0.418615229578519,-1.19284664445512,-0.317058697365553,-2.09588862118766,-0.110090443955434,-1.86344580864635,-0.362988753776709,0.110547858628248,0.710595290181272,-0.584203779860014,-0.488843461401955,-0.755937534777875,-0.338460306434253,-0.440817091535429,0.630717930122483,2.26097130604534,-1.00214257647637,-0.3893333043542,-0.700609465886356 uneq rows sub_dt2 4097,4098,4099,4100,4101,4102,4103,4104,4105,4106,4107,4108,4109,4110,4111,4112,4113,4114,4115,4116,4117,4118,4119,4120,4121 uneq rows sub_dt3 -1.28006937074387,-0.233695216285355,0.116609495906375,-0.568711702968754,-1.3434727062105,0.884961604858499,-0.27074969377875,0.739284032280916,0.122093480402512,1.55101487323128,-0.232288654387943,-0.149140641947659,-1.01597912043409,0.224451041910387,-0.717740460039226,1.13314452649104,-0.296639248492818,0.968782233734218,-0.470487545033456,-0.438573506726824,0.979215202799708,0.874708094465106,-0.132373011051268,-0.652206787015379,-0.794285420896532
    
     ── 8. Failure: Single uncompressed vectors (@test_fst.R#105) ──────────────────
     `sub_dt` not equal to `data`.
     Component "WFact": 3546 string mismatches
     args: col: WFact | from: 1 | to: 10000 | setColumns: | compress: 0 | tot_length 10000 cols sub_dt: 1 , rows sub_dt: 10000 cols data: 1 , rows data: 10000 head sub_dt: GAT,RFD,IY,IY,EPKX,DUF,EPKX,MI,DUF,GAT head data: GAT,RFD,IY,IY,EPKX,DUF,EPKX,MI,DUF,GAT unequals: 3546 uneq rows sub_dt1 IY,GAT,GAT,DUF,EPKX,MI,RFD,UKR,DUF,DUF,UKR,EPKX,R,GAT,GAT,IY,R,MI,GAT,R,UKR,MI,GAT,R,R uneq rows sub_dt2 4097,4099,4100,4101,4102,4103,4104,4105,4106,4107,4108,4109,4110,4111,4112,4113,4114,4115,4116,4117,4119,4120,4121,4123,4125 uneq rows sub_dt3 GAT,IY,IY,EPKX,DUF,EPKX,MI,DUF,GAT,IY,GAT,MI,DUF,EPKX,DUF,MI,MI,RFD,EPKX,RFD,GAT,IY,DUF,IY,IY
    
     ── 9. Failure: Single uncompressed vectors (@test_fst.R#105) ──────────────────
     `sub_dt` not equal to `data`.
     Component "Ordered": 3622 string mismatches
     args: col: Ordered | from: 1 | to: 10000 | setColumns: | compress: 0 | tot_length 10000 cols sub_dt: 1 , rows sub_dt: 10000 cols data: 1 , rows data: 10000 head sub_dt: B,DRI,CUL,PRJM,CUL,PI,CUL,CUL,B,MWK head data: B,DRI,CUL,PRJM,CUL,PI,CUL,CUL,B,MWK unequals: 3622 uneq rows sub_dt1 LVE,MWK,PI,MWK,MWK,PRJM,CUL,B,CWT,MWK,CUL,MWK,MWK,B,CWT,DRI,MWK,B,CWT,PRJM,CUL,MWK,LVE,CUL,LVE uneq rows sub_dt2 4097,4100,4101,4102,4103,4104,4105,4106,4107,4109,4110,4111,4112,4113,4114,4115,4116,4117,4118,4119,4120,4121,4122,4123,4124 uneq rows sub_dt3 B,PRJM,CUL,PI,CUL,CUL,B,MWK,B,B,CWT,CWT,B,MWK,B,MWK,PI,MWK,PRJM,PI,CWT,LVE,MWK,B,CUL
    
     ── 10. Failure: Single uncompressed vectors (@test_fst.R#105) ─────────────────
     `sub_dt` not equal to `data`.
     Component "Date": Mean relative difference: 0.6670034
     args: col: Date | from: 1 | to: 10000 | setColumns: | compress: 0 | tot_length 10000 cols sub_dt: 1 , rows sub_dt: 10000 cols data: 1 , rows data: 10000 head sub_dt: 1978-11-01,1975-03-03,1983-11-14,1987-02-24,1992-12-01,1971-02-19,1971-09-05,1989-01-23,1982-08-13,1983-06-16 head data: 1978-11-01,1975-03-03,1983-11-14,1987-02-24,1992-12-01,1971-02-19,1971-09-05,1989-01-23,1982-08-13,1983-06-16 unequals: 4096 uneq rows sub_dt1 1971-11-13,1986-08-25,1980-11-25,1978-04-09,1990-06-08,1993-06-01,1992-08-19,1986-09-23,1970-04-06,1976-12-11,1983-05-01,1992-06-03,1986-10-15,1992-08-20,1983-09-03,1980-03-23,1989-12-02,1988-06-21,1972-05-29,1994-01-12,1988-07-12,1975-10-03,1976-05-31,1982-10-27,1983-11-30 uneq rows sub_dt2 4097,4098,4099,4100,4101,4102,4103,4104,4105,4106,4107,4108,4109,4110,4111,4112,4113,4114,4115,4116,4117,4118,4119,4120,4121 uneq rows sub_dt3 1980-01-11,1974-08-26,1985-09-09,1992-12-28,1994-09-09,1986-01-31,1991-06-11,1987-07-28,1980-06-17,1981-02-06,1979-05-07,1997-03-20,1985-03-29,1993-10-07,1982-04-30,1993-08-27,1971-06-07,1984-02-06,1993-02-12,1979-08-24,1974-04-27,1973-06-01,1991-12-25,1996-11-18,1975-03-23
    
     ── 11. Failure: Single uncompressed vectors (@test_fst.R#105) ─────────────────
     `sub_dt` not equal to `data`.
     Component "DateDouble": Mean relative difference: 0.1813955
     args: col: DateDouble | from: 1 | to: 10000 | setColumns: | compress: 0 | tot_length 10000 cols sub_dt: 1 , rows sub_dt: 10000 cols data: 1 , rows data: 10000 head sub_dt: 2015-01-02,2015-01-03,2015-01-04,2015-01-05,2015-01-06,2015-01-07,2015-01-08,2015-01-09,2015-01-10,2015-01-11 head data: 2015-01-02,2015-01-03,2015-01-04,2015-01-05,2015-01-06,2015-01-07,2015-01-08,2015-01-09,2015-01-10,2015-01-11 unequals: 4096 uneq rows sub_dt1 2026-03-21,2026-03-22,2026-03-23,2026-03-24,2026-03-25,2026-03-26,2026-03-27,2026-03-28,2026-03-29,2026-03-30,2026-03-31,2026-04-01,2026-04-02,2026-04-03,2026-04-04,2026-04-05,2026-04-06,2026-04-07,2026-04-08,2026-04-09,2026-04-10,2026-04-11,2026-04-12,2026-04-13,2026-04-14 uneq rows sub_dt2 4097,4098,4099,4100,4101,4102,4103,4104,4105,4106,4107,4108,4109,4110,4111,4112,4113,4114,4115,4116,4117,4118,4119,4120,4121 uneq rows sub_dt3 2037-06-07,2037-06-08,2037-06-09,2037-06-10,2037-06-11,2037-06-12,2037-06-13,2037-06-14,2037-06-15,2037-06-16,2037-06-17,2037-06-18,2037-06-19,2037-06-20,2037-06-21,2037-06-22,2037-06-23,2037-06-24,2037-06-25,2037-06-26,2037-06-27,2037-06-28,2037-06-29,2037-06-30,2037-07-01
    
     ── 12. Failure: Single uncompressed vectors (@test_fst.R#105) ─────────────────
     `sub_dt` not equal to `data`.
     Component "Difftime": Mean relative difference: 0.6666125
     args: col: Difftime | from: 1 | to: 10000 | setColumns: | compress: 0 | tot_length 10000 cols sub_dt: 1 , rows sub_dt: 10000 cols data: 1 , rows data: 10000 head sub_dt: 0.999043226242065,1.99904322624207,2.99904322624207,3.99904322624207,4.99904322624207,5.99904322624207,6.99904322624207,7.99904322624207,8.99904322624207,9.99904322624207 head data: 0.999043226242065,1.99904322624207,2.99904322624207,3.99904322624207,4.99904322624207,5.99904322624207,6.99904322624207,7.99904322624207,8.99904322624207,9.99904322624207 unequals: 4096 uneq rows sub_dt1 4096.99904322624,4097.99904322624,4098.99904322624,4099.99904322624,4100.99904322624,4101.99904322624,4102.99904322624,4103.99904322624,4104.99904322624,4105.99904322624,4106.99904322624,4107.99904322624,4108.99904322624,4109.99904322624,4110.99904322624,4111.99904322624,4112.99904322624,4113.99904322624,4114.99904322624,4115.99904322624,4116.99904322624,4117.99904322624,4118.99904322624,4119.99904322624,4120.99904322624 uneq rows sub_dt2 4097,4098,4099,4100,4101,4102,4103,4104,4105,4106,4107,4108,4109,4110,4111,4112,4113,4114,4115,4116,4117,4118,4119,4120,4121 uneq rows sub_dt3 8192.99904322624,8193.99904322624,8194.99904322624,8195.99904322624,8196.99904322624,8197.99904322624,8198.99904322624,8199.99904322624,8200.99904322624,8201.99904322624,8202.99904322624,8203.99904322624,8204.99904322624,8205.99904322624,8206.99904322624,8207.99904322624,8208.99904322624,8209.99904322624,8210.99904322624,8211.99904322624,8212.99904322624,8213.99904322624,8214.99904322624,8215.99904322624,8216.99904322624
    
     ── 13. Failure: Single uncompressed vectors (@test_fst.R#105) ─────────────────
     `sub_dt` not equal to `data`.
     Component "DiffTime_int": Mean relative difference: 0.6667209
     args: col: DiffTime_int | from: 1 | to: 10000 | setColumns: | compress: 0 | tot_length 10000 cols sub_dt: 1 , rows sub_dt: 10000 cols data: 1 , rows data: 10000 head sub_dt: 0,1,2,3,4,5,6,7,8,9 head data: 0,1,2,3,4,5,6,7,8,9 unequals: 4096 uneq rows sub_dt1 4096,4097,4098,4099,4100,4101,4102,4103,4104,4105,4106,4107,4108,4109,4110,4111,4112,4113,4114,4115,4116,4117,4118,4119,4120 uneq rows sub_dt2 4097,4098,4099,4100,4101,4102,4103,4104,4105,4106,4107,4108,4109,4110,4111,4112,4113,4114,4115,4116,4117,4118,4119,4120,4121 uneq rows sub_dt3 8192,8193,8194,8195,8196,8197,8198,8199,8200,8201,8202,8203,8204,8205,8206,8207,8208,8209,8210,8211,8212,8213,8214,8215,8216
    
     ── 14. Failure: Single weakly compressed vectors (@test_fst.R#120) ────────────
     `sub_dt` not equal to `data`.
     Component "Ylog": 'is.NA' value mismatch: 2935 in current 3397 in target
     args: col: Ylog | from: 1 | to: 10000 | setColumns: | compress: 30 | tot_length 10000 cols sub_dt: 1 , rows sub_dt: 10000 cols data: 1 , rows data: 10000 head sub_dt: FALSE,FALSE,FALSE,NA,FALSE,TRUE,NA,TRUE,NA,TRUE head data: NA,NA,NA,NA,NA,TRUE,NA,NA,TRUE,TRUE unequals: NA uneq rows sub_dt1 NA,NA,NA,NA,NA,NA,NA,NA,NA,TRUE,TRUE,FALSE,NA,NA,NA,NA,TRUE,NA,TRUE,NA,NA,NA,TRUE,NA,NA uneq rows sub_dt2 NA,NA,NA,NA,NA,NA,NA,NA,NA,13,15,16,NA,NA,NA,NA,21,NA,23,NA,NA,NA,27,NA,NA uneq rows sub_dt3 NA,NA,NA,NA,NA,NA,NA,NA,NA,TRUE,TRUE,TRUE,NA,NA,NA,NA,TRUE,NA,TRUE,NA,NA,NA,TRUE,NA,NA
    
    
     *** caught segfault ***
     address 25cc96c1, cause 'memory not mapped'
Flavor: r-patched-solaris-x86