CRAN Package Check Results for Package epiphy

Last updated on 2019-08-19 20:46:14 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3.4 23.38 111.71 135.09 OK
r-devel-linux-x86_64-debian-gcc 0.3.4 20.07 81.44 101.51 OK
r-devel-linux-x86_64-fedora-clang 0.3.4 170.74 OK
r-devel-linux-x86_64-fedora-gcc 0.3.4 161.82 OK
r-devel-windows-ix86+x86_64 0.3.4 70.00 214.00 284.00 OK
r-patched-linux-x86_64 0.3.4 23.94 103.41 127.35 OK
r-patched-solaris-x86 0.3.4 147.20 ERROR
r-release-linux-x86_64 0.3.4 22.31 103.63 125.94 OK
r-release-windows-ix86+x86_64 0.3.4 48.00 155.00 203.00 OK
r-release-osx-x86_64 0.3.4 OK
r-oldrel-windows-ix86+x86_64 0.3.4 75.00 205.00 280.00 OK
r-oldrel-osx-x86_64 0.3.4 OK

Check Details

Version: 0.3.4
Check: examples
Result: ERROR
    Running examples in ‘epiphy-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: sadie
    > ### Title: Spatial Analysis by Distance IndicEs (SADIE).
    > ### Aliases: sadie sadie.data.frame sadie.matrix sadie.count
    > ### sadie.incidence
    >
    > ### ** Examples
    >
    > set.seed(123)
    > # Create an intensity object:
    > my_count <- count(aphids, mapping(x = xm, y = ym))
    > # Only compute Perry's indices:
    > my_res <- sadie(my_count)
    Error in dyn.load(file, DLLpath = DLLpath, ...) :
     unable to load shared object '/home/ripley/R/Lib32/transport/libs/transport.so':
     ld.so.1: R: fatal: relocation error: file /home/ripley/R/Lib32/transport/libs/transport.so: symbol GOMP_parallel: referenced symbol not found
    Calls: sadie ... getNamespace -> loadNamespace -> library.dynam -> dyn.load
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.3.4
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘defs-and-eqns.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘defs-and-eqns.Rmd’
    
    --- re-building ‘epiphy.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Warning in chisq.test2(freq$observed, freq$random, n_est = n_est[["random"]], :
     Chi-squared approximation may be incorrect.
    Warning in chisq.test2(freq$observed, freq$aggregated, n_est = n_est[["aggregated"]], :
     Chi-squared approximation may be incorrect.
    Warning in chisq.test2(freq$observed, freq$random, n_est = n_est[["random"]], :
     Chi-squared approximation may be incorrect.
    Warning in chisq.test2(freq$observed, freq$aggregated, n_est = n_est[["aggregated"]], :
     Chi-squared approximation may be incorrect.
    Quitting from lines 201-208 (epiphy.Rmd)
    Error: processing vignette 'epiphy.Rmd' failed with diagnostics:
    unable to load shared object '/home/ripley/R/Lib32/transport/libs/transport.so':
     ld.so.1: R: fatal: relocation error: file /home/ripley/R/Lib32/transport/libs/transport.so: symbol GOMP_parallel: referenced symbol not found
    --- failed re-building ‘epiphy.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘epiphy.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86