CRAN Package Check Results for Package dynutils

Last updated on 2019-11-14 09:49:28 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.4 31.87 129.88 161.75 OK
r-devel-linux-x86_64-debian-gcc 1.0.4 22.13 101.04 123.17 OK
r-devel-linux-x86_64-fedora-clang 1.0.4 197.86 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0.4 196.58 NOTE
r-devel-windows-ix86+x86_64 1.0.4 74.00 245.00 319.00 OK
r-patched-linux-x86_64 1.0.4 23.92 123.81 147.73 OK
r-patched-solaris-x86 1.0.4 236.50 ERROR
r-release-linux-x86_64 1.0.4 25.50 124.15 149.65 OK
r-release-windows-ix86+x86_64 1.0.4 53.00 259.00 312.00 OK
r-release-osx-x86_64 1.0.4 NOTE
r-oldrel-windows-ix86+x86_64 1.0.4 53.00 229.00 282.00 OK
r-oldrel-osx-x86_64 1.0.4 NOTE

Check Details

Version: 1.0.4
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘desc’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.0.4
Check: tests
Result: ERROR
     Running ‘testthat.R’ [68s/51s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     >
     > test_check("dynutils")
     Loading required package: dynutils
    
     Attaching package: 'dynutils'
    
     The following object is masked from 'package:testthat':
    
     has_names
    
     ── 1. Error: write_h5 and read_h5 works (@test-h5.R#9) ────────────────────────
     HDF5-API H5F.c in H5Fcreate(): line 444: unable to create file
     class: HDF5
     major: File accessibilty
     minor: Unable to open file
    
     error #001: H5Fint.c in H5F__create(): line 1364: unable to open file
     class: HDF5
     major: File accessibilty
     minor: Unable to open file
    
     error #002: H5Fint.c in H5F_open(): line 1615: unable to lock the file
     class: HDF5
     major: File accessibilty
     minor: Unable to open file
    
     error #003: H5FD.c in H5FD_lock(): line 1640: driver lock request failed
     class: HDF5
     major: Virtual File Layer
     minor: Can't update object
    
     error #004: H5FDsec2.c in H5FD_sec2_lock(): line 941: unable to lock file, errno = 14, error message = 'Bad address'
     class: HDF5
     major: File accessibilty
     minor: Bad file ID accessed
     Backtrace:
     1. dynutils::write_h5(obj, file)
     2. hdf5r::H5File$new(path, "w")
     3. .subset2(public_bind_env, "initialize")(...)
     4. hdf5r:::H5File.open(filename, mode, file_create_pl, file_access_pl)
    
     ❌ Unable to write hdf5 files
     ── 2. Error: test_h5_installation works (@test-h5.R#17) ───────────────────────
     HDF5-API H5F.c in H5Fcreate(): line 444: unable to create file
     class: HDF5
     major: File accessibilty
     minor: Unable to open file
    
     error #001: H5Fint.c in H5F__create(): line 1364: unable to open file
     class: HDF5
     major: File accessibilty
     minor: Unable to open file
    
     error #002: H5Fint.c in H5F_open(): line 1615: unable to lock the file
     class: HDF5
     major: File accessibilty
     minor: Unable to open file
    
     error #003: H5FD.c in H5FD_lock(): line 1640: driver lock request failed
     class: HDF5
     major: Virtual File Layer
     minor: Can't update object
    
     error #004: H5FDsec2.c in H5FD_sec2_lock(): line 941: unable to lock file, errno = 14, error message = 'Bad address'
     class: HDF5
     major: File accessibilty
     minor: Bad file ID accessed
     Backtrace:
     1. testthat::expect_true(test_h5_installation())
     4. dynutils::test_h5_installation()
     5. dynutils:::test_h5_installation_write(detailed, obj)
     6. base::tryCatch(...)
     7. base:::tryCatchList(expr, classes, parentenv, handlers)
     8. base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     9. value[[3L]](cond)
    
     ── 3. Error: errors gracefully (@test-h5.R#39) ────────────────────────────────
     HDF5-API H5F.c in H5Fcreate(): line 444: unable to create file
     class: HDF5
     major: File accessibilty
     minor: Unable to open file
    
     error #001: H5Fint.c in H5F__create(): line 1364: unable to open file
     class: HDF5
     major: File accessibilty
     minor: Unable to open file
    
     error #002: H5Fint.c in H5F_open(): line 1615: unable to lock the file
     class: HDF5
     major: File accessibilty
     minor: Unable to open file
    
     error #003: H5FD.c in H5FD_lock(): line 1640: driver lock request failed
     class: HDF5
     major: Virtual File Layer
     minor: Can't update object
    
     error #004: H5FDsec2.c in H5FD_sec2_lock(): line 941: unable to lock file, errno = 14, error message = 'Bad address'
     class: HDF5
     major: File accessibilty
     minor: Bad file ID accessed
     Backtrace:
     1. hdf5r::H5File$new(file, mode = "w")
     2. .subset2(public_bind_env, "initialize")(...)
     3. hdf5r:::H5File.open(filename, mode, file_create_pl, file_access_pl)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 401 | SKIPPED: 1 | WARNINGS: 2 | FAILED: 3 ]
     1. Error: write_h5 and read_h5 works (@test-h5.R#9)
     2. Error: test_h5_installation works (@test-h5.R#17)
     3. Error: errors gracefully (@test-h5.R#39)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-patched-solaris-x86