CRAN Package Check Results for Package bclust

Last updated on 2019-04-25 21:51:35 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.5 7.07 32.28 39.35 ERROR
r-devel-linux-x86_64-debian-gcc 1.5 4.56 25.74 30.30 ERROR
r-devel-linux-x86_64-fedora-clang 1.5 48.20 NOTE
r-devel-linux-x86_64-fedora-gcc 1.5 44.60 NOTE
r-devel-windows-ix86+x86_64 1.5 21.00 54.00 75.00 OK
r-patched-linux-x86_64 1.5 6.02 32.26 38.28 ERROR
r-patched-solaris-x86 1.5 68.40 OK
r-release-linux-x86_64 1.5 5.10 30.60 35.70 ERROR
r-release-windows-ix86+x86_64 1.5 14.00 53.00 67.00 OK
r-release-osx-x86_64 1.5 OK
r-oldrel-windows-ix86+x86_64 1.5 12.00 57.00 69.00 OK
r-oldrel-osx-x86_64 1.5 OK

Check Details

Version: 1.5
Check: examples
Result: ERROR
    Running examples in 'bclust-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: profileplot
    > ### Title: a plot useful to visualise replicated data
    > ### Aliases: profileplot
    >
    > ### ** Examples
    >
    > data(gaelle)
    > #take a subset of gaelle data
    > subgaelle<-gaelle[1:11,]
    >
    > #use thresholds to define blob colors
    > blob<-matrix(0,nrow(subgaelle),ncol(subgaelle))
    > blob[abs(subgaelle)<=0.74]<-0
    > blob[abs(subgaelle)>0.74]<-1
    > blob[abs(subgaelle)>0.94]<-2
    > blob[abs(subgaelle)>1.28]<-3
    > profileplot(subgaelle,1:nrow(subgaelle),scale=10,blob.matrix=blob)
    >
    > #make a profile plot with colored blobs
    > ####### attach a profileplot to a teeth plot
    > subgaelle.bclust<-bclust(subgaelle,
    + transformed.par=c(-1.84,-0.99,1.63,0.08,-0.16,-1.68))
    2/11
    3/11
    4/11
    5/11
    6/11
    7/11
    8/11
    9/11
    10/11
    11/11
    > # divide plot space into two unequal parts
    > layout(matrix(c(1,2),1,2,byrow=TRUE), c(9,1),10, respect=TRUE)
    > # associate a color to each subject
    > subgaelle.color<-c(rep("blue",3),rep("green",4),rep("magenta",4))
    > # find appropriate order to plot subjects
    > subgaelle.order<-order.dendrogram(as.dendrogram(subgaelle.bclust))
    > #leave some space for labels
    > x.mar<-7
    > y.mar<-5
    > profileplot(subgaelle,rep.id=1:nrow(subgaelle),scale=10,
    + profile.col=subgaelle.color,plot.order=subgaelle.order,
    + xlab.mar=x.mar,ylab.mar=y.mar)
    > par(mar=c(x.mar,0,0,0))
    > teethplot(subgaelle.bclust)
    Error in xy.coords(x, y) : 'x' and 'y' lengths differ
    Calls: teethplot -> points -> points.default -> plot.xy -> xy.coords
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.5
Check: compiled code
Result: NOTE
    File ‘bclust/libs/bclust.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc