CRAN Package Check Results for Package NeatMap

Last updated on 2019-09-21 19:46:59 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3.6.2 8.34 53.70 62.04 NOTE
r-devel-linux-x86_64-debian-gcc 0.3.6.2 6.33 41.30 47.63 NOTE
r-devel-linux-x86_64-fedora-clang 0.3.6.2 74.81 NOTE
r-devel-linux-x86_64-fedora-gcc 0.3.6.2 72.10 NOTE
r-devel-windows-ix86+x86_64 0.3.6.2 43.00 138.00 181.00 NOTE
r-patched-linux-x86_64 0.3.6.2 7.91 52.30 60.21 NOTE
r-patched-solaris-x86 0.3.6.2 104.00 NOTE
r-release-linux-x86_64 0.3.6.2 7.59 52.36 59.95 NOTE
r-release-windows-ix86+x86_64 0.3.6.2 17.00 105.00 122.00 NOTE
r-release-osx-x86_64 0.3.6.2 WARN
r-oldrel-windows-ix86+x86_64 0.3.6.2 15.00 104.00 119.00 NOTE
r-oldrel-osx-x86_64 0.3.6.2 NOTE

Check Details

Version: 0.3.6.2
Check: R code for possible problems
Result: NOTE
    data.reduction: no visible global function definition for 'prcomp'
    data.reduction: no visible global function definition for 'hclust'
    data.reduction: no visible global function definition for 'as.dist'
    data.reduction: no visible global function definition for 'cor'
    data.reduction: no visible global function definition for 'dist'
    heatmap1: no visible global function definition for 'sd'
    lineplot: no visible global function definition for 'sd'
    normalize: no visible global function definition for 'sd'
    profileplot3d : ColorFunction: no visible global function definition
     for 'rgb'
    profileplot3d : ColorFunction: no visible global function definition
     for 'colorRamp'
    profileplot3d: no visible global function definition for 'sd'
    profileplot3d: no visible global function definition for 'gray'
    Undefined global functions or variables:
     as.dist colorRamp cor dist gray hclust prcomp rgb sd
    Consider adding
     importFrom("grDevices", "colorRamp", "gray", "rgb")
     importFrom("stats", "as.dist", "cor", "dist", "hclust", "prcomp", "sd")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.3.6.2
Check: compiled code
Result: NOTE
    File 'NeatMap/libs/NeatMap.so':
     Found 'rand', possibly from 'rand' (C)
     Object: 'nMDS_R.o'
     Found 'srand', possibly from 'srand' (C)
     Object: 'nMDS_R.o'
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor use Fortran I/O
    nor system RNGs.
    
    See 'Writing portable packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.3.6.2
Check: compiled code
Result: NOTE
    File ‘NeatMap/libs/NeatMap.so’:
     Found ‘rand’, possibly from ‘rand’ (C)
     Object: ‘nMDS_R.o’
     Found ‘srand’, possibly from ‘srand’ (C)
     Object: ‘nMDS_R.o’
    File ‘NeatMap/libs/NeatMap.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor use Fortran I/O
    nor system RNGs.
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.3.6.2
Check: compiled code
Result: NOTE
    File 'NeatMap/libs/i386/NeatMap.dll':
     Found 'rand', possibly from 'rand' (C)
     Object: 'nMDS_R.o'
     Found 'srand', possibly from 'srand' (C)
     Object: 'nMDS_R.o'
    File 'NeatMap/libs/x64/NeatMap.dll':
     Found 'rand', possibly from 'rand' (C)
     Object: 'nMDS_R.o'
     Found 'srand', possibly from 'srand' (C)
     Object: 'nMDS_R.o'
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor use Fortran I/O
    nor system RNGs.
    
    See 'Writing portable packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.3.6.2
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
Flavor: r-release-osx-x86_64

Version: 0.3.6.2
Check: compiled code
Result: NOTE
    File ‘NeatMap/libs/NeatMap.so’:
     Found ‘_rand’, possibly from ‘rand’ (C)
     Object: ‘nMDS_R.o’
     Found ‘_srand’, possibly from ‘srand’ (C)
     Object: ‘nMDS_R.o’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor use Fortran I/O
    nor system RNGs.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64