CRAN Package Check Results for Package CNOGpro

Last updated on 2020-04-04 04:49:53 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1 3.62 44.60 48.22 NOTE
r-devel-linux-x86_64-debian-gcc 1.1 2.68 33.27 35.95 NOTE
r-devel-linux-x86_64-fedora-clang 1.1 55.67 NOTE
r-devel-linux-x86_64-fedora-gcc 1.1 57.22 NOTE
r-devel-windows-ix86+x86_64 1.1 7.00 48.00 55.00 NOTE
r-devel-windows-ix86+x86_64-gcc8 1.1 7.00 53.00 60.00 NOTE
r-patched-linux-x86_64 1.1 3.43 43.05 46.48 NOTE
r-patched-solaris-x86 1.1 85.70 NOTE
r-release-linux-x86_64 1.1 2.64 39.83 42.47 NOTE
r-release-windows-ix86+x86_64 1.1 7.00 81.00 88.00 NOTE
r-release-osx-x86_64 1.1 NOTE
r-oldrel-windows-ix86+x86_64 1.1 7.00 50.00 57.00 NOTE
r-oldrel-osx-x86_64 1.1 NOTE

Check Details

Version: 1.1
Check: R code for possible problems
Result: NOTE
    copynumberBootstrap: no visible global function definition for
     'txtProgressBar'
    copynumberBootstrap: no visible global function definition for
     'quantile'
    copynumberBootstrap: no visible global function definition for
     'setTxtProgressBar'
    gethits: no visible global function definition for 'read.table'
    normalizeGC: no visible global function definition for 'median'
    plotCNOGpro: no visible global function definition for 'par'
    plotCNOGpro: no visible global function definition for 'rainbow'
    plotCNOGpro: no visible global function definition for 'density'
    plotCNOGpro: no visible global function definition for 'polygon'
    plotCNOGpro: no visible global function definition for 'lines'
    plotCNOGpro: no visible global function definition for 'legend'
    plotCNOGpro: no visible global function definition for 'boxplot'
    sampleChromosome: no visible global function definition for 'median'
    sampleChromosome: no visible binding for global variable 'var'
    setupEmissionMatrix: no visible global function definition for 'dgeom'
    store: no visible global function definition for 'write.table'
    Undefined global functions or variables:
     boxplot density dgeom legend lines median par polygon quantile
     rainbow read.table setTxtProgressBar txtProgressBar var write.table
    Consider adding
     importFrom("grDevices", "rainbow")
     importFrom("graphics", "boxplot", "legend", "lines", "par", "polygon")
     importFrom("stats", "density", "dgeom", "median", "quantile", "var")
     importFrom("utils", "read.table", "setTxtProgressBar",
     "txtProgressBar", "write.table")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-linux-x86_64, r-patched-solaris-x86

Version: 1.1
Check: R code for possible problems
Result: NOTE
    copynumberBootstrap: no visible global function definition for
     ‘txtProgressBar’
    copynumberBootstrap: no visible global function definition for
     ‘quantile’
    copynumberBootstrap: no visible global function definition for
     ‘setTxtProgressBar’
    gethits: no visible global function definition for ‘read.table’
    normalizeGC: no visible global function definition for ‘median’
    plotCNOGpro: no visible global function definition for ‘par’
    plotCNOGpro: no visible global function definition for ‘plot’
    plotCNOGpro: no visible global function definition for ‘rainbow’
    plotCNOGpro: no visible global function definition for ‘density’
    plotCNOGpro: no visible global function definition for ‘polygon’
    plotCNOGpro: no visible global function definition for ‘lines’
    plotCNOGpro: no visible global function definition for ‘legend’
    plotCNOGpro: no visible global function definition for ‘boxplot’
    sampleChromosome: no visible global function definition for ‘median’
    sampleChromosome: no visible binding for global variable ‘var’
    setupEmissionMatrix: no visible global function definition for ‘dgeom’
    store: no visible global function definition for ‘write.table’
    Undefined global functions or variables:
     boxplot density dgeom legend lines median par plot polygon quantile
     rainbow read.table setTxtProgressBar txtProgressBar var write.table
    Consider adding
     importFrom("grDevices", "rainbow")
     importFrom("graphics", "boxplot", "legend", "lines", "par", "plot",
     "polygon")
     importFrom("stats", "density", "dgeom", "median", "quantile", "var")
     importFrom("utils", "read.table", "setTxtProgressBar",
     "txtProgressBar", "write.table")
    to your NAMESPACE file.
Flavors: r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64